Sequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated




descargar 45.4 Kb.
títuloSequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated
fecha de publicación06.08.2016
tamaño45.4 Kb.
tipoDocumentos
b.se-todo.com > Biología > Documentos
ESM.3a Sequence homology between TIGR 10K clones encoding cystein protease inhibitors. % of identitity (Id) and query coverage (Q-C) is indicated.




STMGU47

STMHQ67

STMCE08

STMCL26

STMCV60

STMCX33




Id

Q-c

Id

Q-c

Id

Q-c

Id

Q-c

Id

Q-c

Id

Q-c

STMGU47

100

100

84

100

67

97

74

86

71

95

73

98

STMHQ67

84

86

100

100

83

97

83

77

84

95

83

98

STMCE08

67

33

83

78

100

100

100

35

97

48

100

48

STMCL26

74

97

83

100

100

100

100

100

97

95

100

100

STMCV60

73

61

79

78

78

54

97

34

100

100

97

48

STMCX33

73

79

83

91

91

100

100

72

97

95

100

100

ESM.3b Sequence homology between TIGR 10K clones encoding cystein protease inhibitors (CPIs) and transcripts from CPI genes from Solanum phureja genome, the PGSC0003DMT4000

accession number is indicated in brackets. % of Identity (Id) and query coverage (Q-c) are indicated

 

 

CPI-1 (26265)

CPI-1 (26272)

CPI-1 (26276)

CPI-1 (26285)

CPI-9 (26288)

KI-II (01339)

STMGU47

Id

72%

72%

79%

80%

75%

60%

Q-c

78%

78%

70%

70%

47%

3%

STMHQ67

Id

80%

81%

91%

91%

82%

ND

Q-c

75%

70%

70%

70%

60%

ND

STMCE08

Id

75%

83%

76%

76%

76%

ND

Q-c

51%

69%

52%

60%

52%

ND

STMCL26

Id

77%

82%

81%

80%

69%

27%

Q-c

70%

90%

76%

76%

52%

17%

STMCV60

Id

75%

80%

80%

80%

67%

ND

Q-c

73%

73%

94%

94%

93%

ND

STMCX33

Id

74%

82%

79%

79%

69%

60%

Q-c

71%

79%

70%

70%

62%

4%

ESM.3c: b. Sequence homology among CPIs transcripts from S. Phureja. thePGSC0003DMT4000 accession number is indicated in brackets. Percentage corresponds to identical nucleotides.


PGSC0003DMT4000

CPI-1 (26265)

CPI-1 (26272)

CPI-1 (26276)

CPI-1 (26285)

CPI-9 (26288)

CPI-1 (26265)

100%

87%

91%

92%

94%

CPI-1 (26272)

87%

100%

91%

91%

92%

CPI-1 (26276)

91%

91%

100%

99%

96%

CPI-1 (26285)

92%

91%

99%

100%

97%

CPI-9 (26288)

94%

92%

96%

97%

100%


ESM. 3 Grandellis et al

Journal: Functional and Integrative Genomics

Title: Transcript profiling reveals that Cystein protease inhibitors are up-regulated in tuber sprouts after extended darkness

Authors: Carolina Grandellis1,3‡, Veronica Giammaria1‡, Elisa Fantino1, Ignacio Cerrudo1,4, Sandra Bachmann1, Franco Santin1, Rita Ulloa1, 2,*
1 Instituto de Investigaciones en Ingeniería Genética y Biología Molecular (INGEBI), Consejo Nacional de Investigaciones Científicas y Técnicas. Vuelta de Obligado 2490 2nd piso, C1428ADN, Buenos Aires, Argentina.

2 Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires

3 Present address: Molecular Biology Division, Instituto de Biología Molecular y Celular de Rosario, Consejo Nacional de Investigaciones Científicas y Técnicas (IBR-CONICET) Ocampo y Esmeralda, Rosario Santa Fe, Argentina.

4 Present address:. Instituto de Biotecnología- Universidad Nacional de Hurlingham, B1688GEZ, Hurlingham, Buenos Aires, Argentina.Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, C1417DSE, Buenos Aires, Argentina.

‡ Both authors contributed equally to this manuscript

* Correspondence to: Dr. Rita María Ulloa rulloa@dna.uba.ar

similar:

Sequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated iconPpar α via hnf4 α regulates the expression of genes encoding hepatic...

Sequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated iconAdditional file 1 Specimen information for the Chilean Flamingo individuals...

Sequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated iconEn estos pacientes, sus ppios Ag, por diferentes mecanismos, comienzan...

Sequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated iconDna sequence of both chromosomes of the cholerae pathogen Vibrio cholerae

Sequence homology between tigr 10K clones encoding cystein protease inhibitors of identitity (Id) and query coverage (q-c) is indicated iconResumen Este estudio tuvo como objetivo evaluar la variación temporal...




Todos los derechos reservados. Copyright © 2019
contactos
b.se-todo.com